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合作论文

共同作者期刊论文

#共同一作, *通讯作者)

2026

Developmental Characteristics of Spontaneous Activity and Functional Connectivity in the Fetal Thalamus

  • Liu J, Zhang Y, Chen L, Qiu L, Zhang H, Zhang Y, Luo L, Liao Y, Ouyang M, Yi X, Ning G, Yang H, Tian Q, Qu H
  • Cerebral Cortex, 2026; 26(4): bhag036

Revealing Membrane Integrity in Human Brain using Oscillating-Gradient Diffusion Sequence in Two Frequency-Varying Regimes

  • Sung D, Chan K, Gerold J, Zhong W, Zheng J, Tian Q, Guo H, Huang SY, Lee HH
  • Magnetic Resonance in Medicine, 2026; 95 (6): 3429-3444

In Vivo Meso-Scale Whole-Brain Quantitative Imaging with Tailored MRF on the NexGen 7T Scanner

  • Cao X, Beckett A, Liao C, Walker E, Zhu Z, Qian Y, Gao M, Wang N, Lin Y, Gong L, McCready MA, Wang Z, Li Z, Vu A, Ma S, Ramos-Llorden G, Tian Q, Kerr A, Yang Y, Feinberg DA, Setsompop K
  • Magnetic Resonance in Medicine, 2026; 95 (5): 2611-2626

DeepMdMRI: Tensor-decomposition Regularized Learning for Fast and High-fidelity Multi-parametric Microstructural MR Imaging

  • Fan W, Cheng J, Tian Q, Li C, Ma X, Yang J, Zou J, Wu R, Chen Z, Feng Y, Zheng H, Wang S
  • Medical Physics, 2026; 53 (3): e70359

Age-related Alterations of Hippocampal Microstructure Quantified using Diffusion MRI in an Unfolded Hippocampal Space

  • Ma Y, Lee H, Chan KS, Eskandarian L, Gaudet K, Tian Q, Bhatt A, Gerold J, Bhatt A, Russo AW, Salat DH, Klawiter EC, Huang SY, Lee HH
  • Aging Cell, 2026; 25(1): e70274

Ultra-high Gradient Connectomics and Microstructure MRI Scanner for Imaging of Human Brain Circuits across Scales

  • Ramos-Llordén G, Lee HH, Davids M, Dietz P, Krug A, Kirsch JE, Mahmutovic M, Müller A, Ma Y, Lee H, Maffei C, Yendiki A, Bilgic B, Park DJ, Tian Q, Clifford B, Lo WC, Stocker S, Fischer J, Ruyters G, Roesler M, Potthast A, Benner T, Rummert E, Schuster R, Basser PJ, Witzel T, Wald LL, Rosen BR, Keil B, Huang SY
  • Nature Biomedical Engineering, 2026; 10 (2): 309-324

2025

Diff5T: Benchmarking Human Brain Diffusion MRI with an Extensive 5.0 Tesla K-Space and Spatial Dataset

  • Wang S, Yu S, Cheng J, Jia S, Tie C, Zhu J, Peng H, Dong Y, He J, Zhang F, Xing Y, Jia X, Yang Q, Tian Q, Guo H, Li G, Zheng H
  • Scientific Data, 2025; 12: 1352

In Vivo Cortical Microstructure Mapping Using High-Gradient Diffusion MRI Accounting for Intercompartmental Water Exchange Effects

  • Dong T, Lee HH, Zang H, Lee H, Tian Q, Wan L, Fan Q, Huang SY
  • NeuroImage, 2025; 314: 121258

Artificial Intelligence without Restriction Surpassing Human Intelligence with Probability One: Theoretical Insight into Secrets of the Brain with AI Twins of the Brain

  • Huang GB, Westover MB, Tan EK, Wang H, Cui D, Ma WY, Wang T, He Q, Wei H, Wang N, Tian Q, Lam KY, Yao X, Wang TY
  • Neurocomputing, 2025; 619: 129053

2024

Individualized White Matter Connectivity of the Articulatory Pathway: An Ultra-high Field Study

  • Lee H, Lee HH, Ma Y, Eskandarian L, Gaudet K, Tian Q, Krijnen EA, Russo AW, Capuano LG, Salat DH, Klawiter EC, Huang SY
  • Aging Cell, 2024; 23: e14267

Individualized White Matter Connectivity of the Articulatory Pathway: An Ultra-high Field Study

  • Lankinen K, Wang R, Tian Q, Wang QM, Perry BJ, Green JR, Kimberley TJ, Ahveninen J, Li S
  • Brain and Language, 2024; 250: 105391

A Twin Study of Altered White Matter Heritability in Youth with Autism

  • Hegarty JP#, Monterrey JC#, Tian Q, Lazzeroni LC, Cleveland SC, Gong X, Phillips JM, Wolke ON, McNab JA, Hallmayer JF, Reiss AL, Hardan AY
  • Journal of the American Academy of Child and Adolescent Psychiatry, 2024; 63 (1): 65-79

2023

Role of Articulatory Motor Networks in Perceptual Categorization of Speech Signals: a 7T fMRI Study

  • Lankinen K, Ahveninen J, Uluç I, Daneshzand M, Mareyam A, Kirsch J, Polimeni J, Healy BC, Tian Q, Khan S, Nummenmaa A, Wang Q, Green JR, Kimberley TJ, Li S
  • Cerebral Cortex, 2023; 33 (15): 11517-11525

Validation of Deep Learning Techniques for Quality Augmentation in Diffusion MRI for Clinical Studies

  • Aja-Fernández S, Martín-Martín C, Planchuelo-Gómez Á, Faiyaz A, Uddin MN, Schifitto G, Tiwari A, Shigwan SJ, Singh RK, Zheng T, Cao Z, Wu D, Blumberg SB, Sen S, Goodwin-Allcock T, Slator PJ, Avci MY, Li Z, Bilgic B, Tian Q, Wang X, Tang Z, Cabezas M, Rauland A, Merhof D, Maria RM, Campos VP, Santini T, Vieira MAC, HashemizadehKolowri S, DiBella E, Peng C, Shen Z, Chen Z, Ullah I, Mani M, Abdolmotalleby H, Eckstrom S, Baete SH, Filipiak P, Dong T, Fan Q, Luis-García R, Tristán-Vega A, Pieciak T
  • NeuroImage: Clinical, 2023; 39: 103483

High-fidelity Mesoscale In-vivo Diffusion MRI through gSlider-BUDA and Circular EPI with S-LORAKS Reconstruction

  • Liao C, Yarach U, Cao X, Iyer SS, Wang N, Kim TH, Tian Q, Bilgic B, Kerr AB, Setsompop K
  • NeuroImage, 2023; 275: 120168

Axonal and Myelin Changes and Their Inter-relationship in the Optic Radiations in People with Multiple Sclerosis

  • Krijnen EA, Ngamsombat C, George I, Yu F, Fan Q, Tian Q, Huang SY, Klawiter EC
  • Multiple Sclerosis Journal: Experimental, Translational and Clinical, 2023; 9(1): 20552173221147620

Synergistic 3D-EPI Blip-Up/Down Acquisition (BUDA) with CAIPI and Joint Hankel Structured Low-Rank Reconstruction for Rapid Distortion-Free High-Resolution T2* Mapping

  • Chen Z, Liao C, Cao X, Poser B, Xu Z, Lo WC, Wen M, Cho J, Tian Q, Wang Y, Feng Y, Xia L, Chen W, Liu F, Bilgic B
  • Magnetic Resonance in Medicine, 2023; 89 (5), 1961-1974

2022

Wave-Encoded Model-based Deep Learning for Highly Accelerated Imaging with Joint Reconstruction

  • Cho J, Gagoski B, Kim TH, Tian Q, Frost SR, Chatnuntawech I, Bilgic B
  • Bioengineering, 2022; 9 (12): 736

High-fidelity, High-spatial-resolution Diffusion MRI of the Ex-vivo Whole Human Brain on the 3T Connectome Scanner using Structured Low-rank EPI Ghost Correction

  • Ramos-Llordén G, Lobos RA, Kim TH, Tian Q, Witzel T, Lee HH, Keil B, Yendiki A, Bilgic B, Haldar JP, Huang SY
  • NMR in Biomedicine, 2022; 36 (2): e4831

Static and Dynamic BOLD fMRI Components along White Matter Fibre Tracts and Their Dependence on the Orientation of the Local Diffusion Tensor Axis Relative to the B0-Field

  • Viessmann O, Tian Q, Bernier M, Polimeni JR
  • Journal of Cerebral Blood Flow and Metabolism, 2022; 42 (10): 1905-1919

Estimating Axial Diffusivity in the NODDI Model

  • Howard AFD, Cottaar C, Drakesmith M, Fan Q, Huang SY, Jones DK, Lange FJ, Mollink J, Rudrapatna SU, Tian Q, Miller KL, Jbabdi S
  • NeuroImage, 2022; 262: 119535

2021

Dissecting Whole-brain Conduction Delays through MRI Microstructural Measures

  • Mancini M, Tian Q, Fan Q, Cercignani M, Huang SY
  • Brain Structure and Function. 2021; 226: 2651-2663

Scan-Rescan Repeatability of Axonal Metrics using High-Gradient Diffusion MRI and Implications for Study Design

  • Fan Q, Polackal NM, Tian Q, Ngamsombat C, Nummenmaa A, Witzel T, Klawiter EC, Huang SY
  • NeuroImage. 2021; 240: 118323

A 48-channel Receive Array Coil for Mesoscopic Diffusion-weighted MRI of Human Ex Vivo Brain Imaging at the 3T Connectome Scanner

  • Scholz A, Etzel R, May MW, Mahmutovic M, Tian Q, Llorden GR, Bilgic B, Witzel T, Stockmann JP, Mekkaoui C, Wald LL, Huang SY, Yendiki A, Keil B
  • NeuroImage, 2021; 238: 118256

Evaluation of Ultrafast Wave-CAIPI 3D FLAIR in the Visualization and Volumetric Estimation of Cerebral White Matter Lesions

  • Ngamsombat C, Filho ALMG, Longo MGF, Cauley SF, Setsompop K, Kirsch JE, Tian Q, Fan Q, Polak D, Liu W, Lo W, González RG, Schaefer PW, Rapalino O, Conklin J, Huang SY
  • American Journal of Neuroradiology, 2021; 42 (9) 1584-1590

In Vivo Human Whole-brain Connectom Diffusion MRI Dataset at 760 μm Isotropic Resolution

  • Wang F, Dong Z, Tian Q, Liao C, Fan Q, Hoge WS, Ngamsombat C, Keil B, Polimeni JR, Wald LL, Huang SY, Setsompop K
  • Scientific Data, 2021; 8 (1): 1-12

Distortion-free, High-isotropic-resolution Diffusion MRI with gSlider BUDA-EPI and Multi-coil Dynamic B0 Shimming

  • Liao C, Bilgic B, Tian Q, Stockmann J, Cao X, Fan Q, Iyer SS, Wang F, Ngamsombat C, Lo WC, Manhard MK, Huang SY, Wald LL, Setsompop K
  • Magnetic Resonance in Medicine, 2021; 86 (2): 791-803

Comparison of Diffusion MRI and CLARITY Fiber Orientation Estimates in Both Gray and White Matter Regions of Human and Primate Brain

  • Leuze CWU#, Goubran M#, Barakovic M#, Aswendt M, Tian Q, Hsueh B, Crow A, Weber E, Steinberg G, Zeineh M, Plowey ED, Daducci A, Innocenti G, Thiran J-P, Deisseroth K, McNab JA
  • NeuroImage, 2021; 228: 117692.

RUN-UP: Accelerated Multi-shot Diffusion-weighted MRI Reconstruction using an Unrolled Network with U-Net as Priors

  • Hu Y, Xu Y, Tian Q, Chen F, Shi X, Moran CJ, Daniel BL, Hargreaves BA
  • Magnetic Resonance in Medicine, 2021; 85 (2): 709-720

2020

Axon Diameter Index Estimation Independent of Fiber Orientation Distribution using High-gradient Diffusion MRI

  • Fan Q, Nummenmaa A, Witzel T, Ohringer N, Tian Q, Setsompop K, Klawiter EC, Rosen BR, Wald LL, Huang SY
  • NeuroImage, 2020; 222: 117197

Evaluation of Ultrafast Wave-CAIPI MPRAGE for Visual Grading and Automated Measurement of Brain Tissue Volume

  • Longo MGF, Conklin J, Cauley SF, Setsompop K, Tian Q, Polak D, Splitthoff D, Liu W, González RG, Schaefer PW, Kirsch JE, Rapalino O, Huang SY
  • American Journal of Neuroradiology, 2020; 41 (8): 1388-1396

Localizing Central Swallowing Functions by Combining Non-invasive Brain Stimulation with Neuroimaging

  • Li S, Eshghi M, Khan S, Tian Q, Joutsa JT, Ou Y, Wang Q, Kong J, Rosen BR, Ahveninen J, Nummenmaa A
  • Brain Stimulation, 2020; 13 (5): 1207-1210

Axonal Damage in the Optic Radiation Assessed by White Matter Tract Integrity Metrics is Associated with Retinal Thinning in Multiple Sclerosis

  • Ngamsombat C, Tian Q, Fan Q, Russo A, Machado N, Polackal M, George IC, Witzel T, Klawiter EC, Huang SY
  • NeuroImage: Clinical, 2020; 27: 102293

Resting-state "Physiological Networks"

  • Chen JE, Lewis LD, Chang C, Tian Q, Fultz NE, Ohringer NA, Rosen BR, Polimeni JR
  • NeuroImage, 2020; 213: 116707

Multi-shot diffusion-weighted MRI reconstruction with magnitude-based spatial-angular locally low-rank regularization (SPA-LLR)

  • Hu Y, Wang X, Tian Q, Yang G, Daniel B, McNab JA, Hargreaves BA
  • Magnetic Resonance in Medicine, 2020; 83 (5): 1596-1607

High-fidelity, High-isotropic-resolution Diffusion Imaging through gSlider Acquisition with B1+ and T1 Corrections and Integrated ΔB0/Rx Shim Array

  • Liao C, Stockmann J, Tian Q, Bilgic B, Arango NS, Manhard MK, Huang SY, Grissom WA, Wald LL, Setsompop K
  • Magnetic Resonance in Medicine, 2020; 83 (1): 56-67

High-gradient Diffusion MRI Reveals Distinct Estimates of Axon Diameter Index within Different White Matter Tracts in the In Vivo Human Brain

  • Huang SY, Tian Q, Fan Q, Witzel T, Wichtmann B, McNab JA, Bireley JD, Machado N, Klawiter EC, Mekkaoui C, Wald LL, Nummenmaa A
  • Brain Structure and Function, 2020; 225 (4): 1277-1291

2019

Multimodal Image Registration and Connectivity Analysis for Integration of Connectomic Data from Microscopy to MRI

  • Goubran M#, Leuze CWU#, Hsueh B#, Aswendt M#, Ye L, Tian Q, Cheng MY, Crow A, Steinberg GK, McNab JA, Deisseroth K, Zeineh M
  • Nature Communications, 2019; 10 (1): 5504

Imaging G-Ratio in Multiple Sclerosis using High-Gradient Diffusion MRI and Macromolecular Tissue Volume

  • Yu F, Fan Q, Tian Q, Ngamsombat C, Machado N, Bireley JD, Russo A, Nummenmaa A, Witzel T, Wald LL, Klawiter EC, Huang SY
  • American Journal of Neuroradiology, 2019; 40 (11): 1871-1877

Highly Accelerated Multishot Echo Planar Imaging through Synergistic Machine Learning and Joint Reconstruction

  • Bilgic B, Chatnuntawech I, Manhard MK, Tian Q, Liao C, Cauley SF, Huang SY, Polimeni JR, Wald LL, Setsompop K
  • Magnetic Resonance in Medicine, 2019; 82 (4): 1343-1358

Multimodal Characterization of the Human Nucleus Accumbens

  • Cartmell SCD, Tian Q, Thio BJ, Leuze C, Ye L, Williams NR, Yang G, Ben-Dor G, Deisseroth K, Grill WM, McNab JA, Halpern CH
  • NeuroImage, 2019; 198: 137-149

Phase-matched Virtual Coil Reconstruction for Highly Accelerated Diffusion Echo-Planar Imaging

  • Liao C, Manhard MK, Bilgic B, Tian Q, Fan Q, Han S, Wang F, Park DJ, Witzel T, Zhong J, Wang H, Wald LL, Setsompop K
  • NeuroImage, 2019; 194: 291-302

Age-related Differences in Apparent Axon Diameter and Axon Density in the Corpus Callosum Measured by High-gradient Diffusion MRI

  • Fan Q, Tian Q, Ohringer NA, Nummenmaa A, Witzel T, Tobyne SM, Klawiter EC, Rosen BR, Wald LL, Salat DH, Huang SY
  • NeuroImage, 2019; 191: 325-336

Motion Robust Reconstruction of Multi-shot Diffusion-weighted Images without Phase Estimation via Locally Low-rank Regularization

  • Hu Y, Levine EG, Tian Q, Moran C, Wang X, Taviani V, Vasanawala S, McNab JA, Daniel BL, Hargreaves BA
  • Magnetic Resonance in Medicine, 2019; 81 (2): 1181-1190

2018

Double Diffusion Encoding MRI for the Clinic

  • Yang G, Tian Q, Leuze CWU, Wintermark M, McNab JA
  • Magnetic Resonance in Medicine, 2018; 80 (2): 507-520

2017

Learning the Image Processing Pipeline

  • Jiang H, Tian Q, Farrell JE, Wandell BA
  • IEEE Transaction on Image Processing, 2017; 26 (10): 5032-5042

The Separate Effects of Lipids and Proteins on Brain MRI Contrast Revealed Through Tissue Clearing

  • Leuze CWU, Aswendt M, Ferenczi E, Liu CW, Hsueh B, Goubran M, Tian Q, Steinberg G, Zeineh M, Deisseroth K, McNab JA
  • NeuroImage, 2017; 156: 412-422

2016

Wiring and Molecular Features of Prefrontal Ensembles Representing Distinct Experiences

  • Ye L#, Allen WE#, Thompson KR#, Tian Q, Hsueh B, Ramakrishnan C, Wang AC, Jennings J, Adhikari A, Halpern CH, Witten IB, Barth AL, Luo L, McNab JA, Deisseroth K
  • Cell, 2016; 165 (7): 1776-1788. (期刊封面)

Local Linear Approximation for Camera Image Processing Pipelines

  • Jiang H, Tian Q, Farrell JE, Wandell BA
  • Proceedings of the Society for Imaging Science and Technology (IS&T), 2016; 1-4(4)

Efficient Illuminant Correction in the Local, Linear, Learned (L3) Method

  • Germain FG, Akinola IA, Tian Q, Lansel SP, Wandell BA
  • Proceedings of the International Society for Optics and Photonics (SPIE), 2015; 9404: 940404